Hi,
Firstly, congrats on JComments: nice work :-)
However, I can't currently use the Tree feature without some sort of pagination. Here are some suggestions for possible ways of improving the functionality:
1) Add the ability to restrict the number of levels (it looks like you are already planning this:
http://www.joomlatune.com/forum/index.php/topic,2886.0.html).
2) Add the ability to show/hide replies. This might enable you to do a few things:
a) Implement pagination (based on top level comments only)
b) Maybe only fetch replies on demand, to minimise the amount of data needed at page load.
I haven't seen any system that does this exactly, but (if you are interested) JA Comments does have the ability to show/hide replies and CompoJoom does support pagination with replies.
Another (custom built) site that has an interesting approach is Animals Australia. They limit replies to one level and have the abiltiy to show/hide replies. My initial thought was that one level isn't enough, but looking at it in practice, it seems to work well. Here is a link to one of their pages with comments:
http://www.animalsaustralia.org/features/rally-against-puppy-factories.php. However, I don't think they support pagination (not sure).
Having looked at other posts, I do know you are thinking about this issue. If you are at a point where you can share what you are planning, then I'd certainly be interested. Also, do you intend to support any of the Joomla versions after 1.5?
Thanks!
David